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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10507936 chr13:84588787 C/T FEZF2 chr3:62355356-62359999:- 0.35 6.78 4.58E-11 Box Plot
BLCA rs10514155 chr18:72793718 A/G CTDP1 chr18:77439801-77516623:+ 0.94 7.65 1.59E-13 Box Plot
BLCA rs10514155 chr18:72793718 A/G HDHD2 chr18:44633774-44676891:- 0.68 6.03 3.78E-9 Box Plot
BLCA rs10514155 chr18:72793718 A/G IER3IP1 chr18:44679205-44702745:- 0.82 6.4 4.68E-10 Box Plot
BLCA rs10514155 chr18:72793718 A/G KDSR chr18:60994959-61034743:- 0.71 6.26 1.04E-9 Box Plot
BLCA rs10514155 chr18:72793718 A/G KIAA1468 chr18:59854491-59975062:+ 0.55 6.09 2.79E-9 Box Plot
BLCA rs10514155 chr18:72793718 A/G MBD2 chr18:51677971-51751158:- 0.69 6.35 6.12E-10 Box Plot
BLCA rs10514155 chr18:72793718 A/G ME2 chr18:48405104-48480627:+ 0.77 6.7 7.52E-11 Box Plot
BLCA rs10514155 chr18:72793718 A/G NARS chr18:55267888-55289445:- 0.76 7.09 6.33E-12 Box Plot
BLCA rs10514155 chr18:72793718 A/G PQLC1 chr18:77662420-77711664:- 0.64 6.61 1.33E-10 Box Plot
BLCA rs10514155 chr18:72793718 A/G RPL17 chr18:47014823-47018893:- 0.56 5.96 5.87E-9 Box Plot
BLCA rs10514155 chr18:72793718 A/G RTTN chr18:67670267-67873181:- 0.7 7.02 9.9E-12 Box Plot
BLCA rs10514155 chr18:72793718 A/G SEC11C chr18:56806709-56826068:+ 0.73 6.67 9.19E-11 Box Plot
BLCA rs10514155 chr18:72793718 A/G SMAD2 chr18:45335328-45457517:- 0.75 6.41 4.27E-10 Box Plot
BLCA rs10514155 chr18:72793718 A/G SMAD4 chr18:48554764-48611415:+ 0.69 6.32 7.22E-10 Box Plot